Index A | B | C | D | E | F | G | I | L | M | O | P | R | S | V | W A ab_half_diagonal_from_cif() (in module coflandscaper) analyze() (coflandscaper.AnalyzeStacking method) AnalyzeStacking (class in coflandscaper) B build() (coflandscaper.BuildCOF2D method) BuildCOF2D (class in coflandscaper) C calculator_settings_for_head() (in module coflandscaper) ChangeIld (class in coflandscaper) coflandscaper module CreateMatrix (class in coflandscaper) Crystal (class in coflandscaper) CrystalOpt (class in coflandscaper) CrystalSP (class in coflandscaper) D default_shift_from_cif() (in module coflandscaper) E extract_atoms() (in module coflandscaper) extract_cif() (coflandscaper.CrystalOpt method) extract_peaks() (coflandscaper.PXRD method) extract_structures() (coflandscaper.CrystalOpt method) F find_last_occurrence() (in module coflandscaper) G generate_input() (coflandscaper.Crystal method) (coflandscaper.CrystalOpt method) get_mode_folders() (in module coflandscaper) guess_symbol() (in module coflandscaper) I IlsIncl (class in coflandscaper) IlsSerr (class in coflandscaper) L Landscape (class in coflandscaper) list_cifs() (in module coflandscaper) M Mace (class in coflandscaper) MaceOpt (class in coflandscaper) MaceSP (class in coflandscaper) module coflandscaper O optimize_cof() (coflandscaper.MaceOpt method) P parse_atom_lines() (in module coflandscaper) parse_cell() (in module coflandscaper) parse_xyz_from_atom_line() (in module coflandscaper) parse_z_L_from_stem() (in module coflandscaper) pick_lower_left_pair_from_lines() (in module coflandscaper) plot_sim() (coflandscaper.PXRD method) plot_sim_vs_exp() (coflandscaper.PXRD method) plot_xy() (coflandscaper.PXRD method) process_cifs() (coflandscaper.MaceOpt method) produce_xy() (coflandscaper.PXRD method) PXRD (class in coflandscaper) R read() (coflandscaper.CrystalOpt method) (coflandscaper.CrystalSP method) read_output() (coflandscaper.CrystalOpt method) (coflandscaper.CrystalSP method) run() (coflandscaper.AnalyzeStacking method) (coflandscaper.ChangeIld method) (coflandscaper.CreateMatrix method) (coflandscaper.Crystal method) (coflandscaper.IlsIncl method) (coflandscaper.IlsSerr method) (coflandscaper.Landscape method) (coflandscaper.PXRD method) (coflandscaper.SelectCofs method) (coflandscaper.Supercell method) run_mode() (coflandscaper.Landscape method) (coflandscaper.MaceOpt method) (coflandscaper.MaceSP method) (coflandscaper.SelectCofs method) run_preopt() (coflandscaper.MaceOpt method) S SelectCofs (class in coflandscaper) Supercell (class in coflandscaper) V view() (coflandscaper.VisualizeCOF method) visualize_cof() (coflandscaper.VisualizeCOF method) visualize_single_layer() (coflandscaper.VisualizeCOF method) VisualizeCOF (class in coflandscaper) W wrap01() (in module coflandscaper)